phan ignore old app/system code for now; ignore missing .githooks to fix

build process

.phan/config.php

@@ -17,6 +17,7 @@ return [
 
 	'exclude_analysis_directory_list' => [
 		'vendor/',
+		'app/System/',
 		'.phan/stubs/'
 	],
 

composer.json

@@ -44,7 +44,7 @@
         "post-create-project-cmd": [
             "@php application app:rename"
         ],
-    	"post-autoload-dump": "cp .githooks/* .git/hooks"
+    	"post-autoload-dump": "if [ -d .githooks ]; then cp .githooks/* .git/hooks; fi"
     },
     "minimum-stability": "dev",
     "prefer-stable": true,